Survival-associated meQTLs across different cancer types


We identified 23,432 meQTLs associated with patient overall survival across different cancer types at FDR < 0.05.


e.g., "BLCA"
e.g., "rs11600543"


Cancer type
SNP ID
SNP position (hg19)
Alleles (A/a)
log-rank test p-value
Sample size
Median survival time AA
Median survival time Aa
Median survival time aa
Dispaly
PRAD rs117847571 chr11:36308830 T/C 9.1E-5 481 30.8 32.43 27.57 KM Plot
PRAD rs117958432 chr20:61670506 C/T 7.2E-6 488 31 33.07 24.15 KM Plot
PRAD rs117959961 chr15:83339895 C/T 4.37E-7 492 31.13 30.77 29.08 KM Plot
PRAD rs11811179 chr1:241992310 C/A 0.000181 483 30.8 32.77 28.6 KM Plot
PRAD rs118187278 chr9:72850295 A/C 1.73E-5 493 30.8 31.35 22.45 KM Plot
PRAD rs11824255 chr11:129964456 A/G 7.97E-7 494 30.93 30.47 29.17 KM Plot
PRAD rs11824950 chr11:24219734 A/T 3.07E-8 492 30.87 31.43 20.93 KM Plot
PRAD rs11857017 chr15:67972908 A/G 4.35E-5 493 33.37 27.97 27.58 KM Plot
PRAD rs11879347 chr19:56093556 A/T 1.9E-5 494 13.62 27.97 31.37 KM Plot
PRAD rs11879392 chr19:45450777 C/G 1.29E-5 485 30.57 30.93 45.2 KM Plot
PRAD rs11901675 chr2:235003459 G/A 0.000171 488 32.27 28.57 29.23 KM Plot
PRAD rs11904741 chr2:131716194 G/A 4.8E-5 488 31.23 31.13 20.12 KM Plot
PRAD rs11906259 chr20:16645825 T/G 1.71E-8 485 30.87 33.88 24.27 KM Plot
PRAD rs11908095 chr20:16645826 C/A 1.71E-8 485 30.87 33.88 24.27 KM Plot
PRAD rs11982872 chr7:150512803 C/A 0.000138 479 28.67 31.4 31.87 KM Plot